Package: HuMMANet
Type: Package
Title: Curated Paired Human Microbiome-Metabolome Study Data
biocViews: ExperimentData, ExperimentHub, Homo_sapiens_Data,
        MicrobiomeData
Version: 0.99.3
Authors@R: 
    c(
      person(
        "Shivangi", "Verma",
        email = "shivangiv@iiitd.ac.in",
        role = c("aut", "fnd"),
        comment = c(ORCID = "0009-0006-8505-0032")
      ),
      person(
        "Nalin", "Arora",
        email = "naa4050@med.cornell.edu",
        role = c("aut", "cre"),
        comment = c(ORCID = "0009-0009-1340-688X")
      ),
      person(
        "Himel", "Mallick",
        email = "him4004@med.cornell.edu",
        role = "aut",
        comment = c(ORCID = "0000-0003-4956-2429")
      ),
      person(
        "Tarini Shankar", "Ghosh",
        email = "tarini.ghosh@iiitd.ac.in",
        role = c("aut", "fnd"),
        comment = c(ORCID = "0000-0001-9570-0365")
      )
    )
Description: Provides access to curated paired human
        microbiome-metabolome study bundles available through
        Bioconductor ExperimentHub. The package organizes matched
        sample metadata, species abundance profiles, original and
        harmonized metabolite profiles, and study-specific annotation
        resources including metabolite identifier mappings, microbial
        producer annotations, disease associations, pathway
        annotations, and drug similarity matches. The resource is
        designed to support consistent and reproducible cross-study
        microbiome-metabolome analyses.
License: MIT + file LICENSE
URL: https://github.com/ShivangiV-IIITD/HuMMANet
BugReports: https://github.com/ShivangiV-IIITD/HuMMANet/issues
Depends: R (>= 4.5.0)
Encoding: UTF-8
Imports: ExperimentHub, MultiAssayExperiment, S4Vectors,
        SummarizedExperiment, stats, utils
Suggests: BiocStyle, knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/roxygen2/version: 8.1.0
Config/pak/sysreqs: libicu-dev libpng-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-09-16 16:39:35 UTC
RemoteUrl: https://github.com/bioc/HuMMANet
RemoteRef: HEAD
RemoteSha: 88bea3d1bba03794a8b613a1a038672c30dd59ce
NeedsCompilation: no
Packaged: 2026-10-10 10:47:37 UTC; root
Author: Shivangi Verma [aut, fnd] (ORCID:
    <https://orcid.org/0009-0006-8505-0032>),
  Nalin Arora [aut, cre] (ORCID: <https://orcid.org/0009-0009-1340-688X>),
  Himel Mallick [aut] (ORCID: <https://orcid.org/0000-0003-4956-2429>),
  Tarini Shankar Ghosh [aut, fnd] (ORCID:
    <https://orcid.org/0000-0001-9570-0365>)
Maintainer: Nalin Arora <naa4050@med.cornell.edu>