# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "HiCParser" in publications use:'
type: software
license: LGPL-2.0-only
title: 'HiCParser: Parser for HiC data in R'
version: 1.5.0
doi: 10.18129/B9.bioc.HiCParser
identifiers:
- type: doi
  value: 10.32614/CRAN.package.HiCParser
abstract: 'This package is a parser to import HiC data into R. It accepts several
  type of data: tabular files, Cooler `.cool` or `.mcool` files, Juicer `.hic` files
  or HiC-Pro `.matrix` and `.bed` files. The HiC data can be several files, for several
  replicates and conditions. The data is formated in an InteractionSet object.'
authors:
- family-names: Matthias
  given-names: Zytnicki
  email: matthias.zytnicki@inrae.fr
- family-names: Élise
  given-names: Maigné
  email: elise.maigne@inrae.fr
preferred-citation:
  type: manual
  title: HiCParser package to parse HiC data and import them in R
  authors:
  - family-names: Maigne
    given-names: Elise
  - family-names: Zytnicki
    given-names: Matthias
  year: '2026'
  url: http://www.bioconductor.org/packages/HiCParser
  notes: https://github.com/emaigne/HiCParser/HiCParser - R package version 0.99.0
  doi: 10.18129/B9.bioc.HiCParser
repository: https://bioc.r-universe.dev
repository-code: https://github.com/emaigne/HiCParser
commit: 7a6b4ef89338747d05c725e1fd738af6d07e7f2d
url: https://github.com/emaigne/HiCParser
date-released: '2025-07-22'
contact:
- family-names: Élise
  given-names: Maigné
  email: elise.maigne@inrae.fr