Package: HSMMSingleCell
Type: Package
Title: Single-cell RNA-Seq for differentiating human skeletal muscle
        myoblasts (HSMM)
Version: 1.33.0
Date: 2014-03-11
Author: Cole Trapnell
Maintainer: Cole Trapnell <cole@broadinstitute.org>
Description: Skeletal myoblasts undergo a well-characterized sequence
        of morphological and transcriptional changes during
        differentiation. In this experiment, primary human skeletal
        muscle myoblasts (HSMM) were expanded under high mitogen
        conditions (GM) and then differentiated by switching to
        low-mitogen media (DM).  RNA-Seq libraries were sequenced from
        each of several hundred cells taken over a time-course of
        serum-induced differentiation. Between 49 and 77 cells were
        captured at each of four time points (0, 24, 48, 72 hours)
        following serum switch using the Fluidigm C1 microfluidic
        system. RNA from each cell was isolated and used to construct
        mRNA-Seq libraries, which were then sequenced to a depth of ~4
        million reads per library, resulting in a complete gene
        expression profile for each cell.
License: Artistic-2.0
biocViews: ExperimentData, RNASeqData
LazyLoad: yes
Packaged: 2026-10-10 10:32:31 UTC; root
Depends: R (>= 2.10)
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:27:00 UTC
RemoteUrl: https://github.com/bioc/HSMMSingleCell
RemoteRef: HEAD
RemoteSha: e86ad4612fbe1b6fbfca7073b98e5364f1fa7d17
NeedsCompilation: no