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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "HERON" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'HERON: Hierarchical Epitope pROtein biNding'
version: 1.3.0
doi: 10.1101/2023.04.23.536620
abstract: HERON is a software package for analyzing peptide binding array data. In
  addition to identifying significant binding probes, HERON also provides functions
  for finding epitopes (string of consecutive peptides within a protein). HERON also
  calculates significance on the probe, epitope, and protein level by employing meta
  p-value methods. HERON is designed for obtaining calls on the sample level and calculates
  fractions of hits for different conditions.
authors:
- family-names: McIlwain
  given-names: Sean
  email: sean.mcilwain@wisc.edu
  orcid: https://orcid.org/0000-0002-3820-8400
- family-names: Ong
  given-names: Irene
  email: irene.ong@wisc.edu
  orcid: https://orcid.org/0000-0002-9353-6941
preferred-citation:
  type: article
  title: Ranking Antibody Binding Epitopes and Proteins Across Samples from Whole
    Proteome Tiled Linear Peptides
  authors:
  - family-names: McIlwain
    given-names: Sean J
  - family-names: Hoefges
    given-names: Anna
  - family-names: Erbe
    given-names: Amy K
  - family-names: Sondel
    given-names: Paul M
  - family-names: Ong
    given-names: Irene M
  journal: bioRxiv
  year: '2023'
  doi: 10.1101/2023.04.23.536620
repository: https://bioc.r-universe.dev
repository-code: https://github.com/Ong-Research/HERON
url: https://github.com/Ong-Research/HERON
date-released: '2023-06-23'
contact:
- family-names: McIlwain
  given-names: Sean
  email: sean.mcilwain@wisc.edu
  orcid: https://orcid.org/0000-0002-3820-8400