Package: HDTD
Type: Package
Title: Statistical Inference about the Mean Matrix and the Covariance
        Matrices in High-Dimensional Transposable Data (HDTD)
Version: 1.47.0
Authors@R: c(
    person(given = "Anestis",
           family = "Touloumis",
           email = "A.Touloumis@brighton.ac.uk",
           role = c("cre","aut"),
           comment = c(ORCID = "0000-0002-5965-1639")),
    person(given = "John C.",
           family = "Marioni",
           role = "aut",
           comment = c(ORCID = "0000-0001-9092-0852")),
    person(given = "Simon",
           family = "Tavar\\'{e}",
           role = "aut",
           comment = c(ORCID = "0000-0002-3716-4952"))
           )
Depends: R (>= 4.1)
Suggests: knitr, rmarkdown
Imports: stats, Rcpp (>= 1.0.1)
LinkingTo: Rcpp, RcppArmadillo
Description: Characterization of intra-individual variability using
        physiologically relevant measurements provides important
        insights into fundamental biological questions ranging from
        cell type identity to tumor development. For each individual,
        the data measurements can be written as a matrix with the
        different subsamples of the individual recorded in the columns
        and the different phenotypic units recorded in the rows.
        Datasets of this type are called high-dimensional transposable
        data. The HDTD package provides functions for conducting
        statistical inference for the mean relationship between the row
        and column variables and for the covariance structure within
        and between the row and column variables.
License: GPL-3
biocViews: DifferentialExpression, Genetics, GeneExpression,
        Microarray, Sequencing, StatisticalMethod, Software
VignetteBuilder: knitr
URL: http://github.com/AnestisTouloumis/HDTD
BugReports: http://github.com/AnestisTouloumis/HDTD/issues
LazyData: false
NeedsCompilation: yes
RoxygenNote: 7.1.1
Encoding: UTF-8
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:39:10 UTC
RemoteUrl: https://github.com/bioc/HDTD
RemoteRef: HEAD
RemoteSha: fbbe8c060dcd201ec961df43b68f1ed3de9c9933
Packaged: 2026-07-04 23:12:47 UTC; root
Author: Anestis Touloumis [cre, aut] (ORCID:
    <https://orcid.org/0000-0002-5965-1639>),
  John C. Marioni [aut] (ORCID: <https://orcid.org/0000-0001-9092-0852>),
  Simon Tavar\'{e} [aut] (ORCID: <https://orcid.org/0000-0002-3716-4952>)
Maintainer: Anestis Touloumis <A.Touloumis@brighton.ac.uk>