Package: GenomicTuples
Type: Package
Title: Representation and Manipulation of Genomic Tuples
Version: 1.47.0
Date: 2025-07-02
Encoding: UTF-8
Authors@R: c(person("Peter", "Hickey", role = c("aut", "cre"),
    email = "peter.hickey@gmail.com"),
    person("Marcin", "Cieslik", role = "ctb",
    email = "marcin.cieslik@gmail.com"),
    person("Hervé", "Pagès", role = "ctb"))
Description: GenomicTuples defines general purpose containers for
        storing genomic tuples. It aims to provide functionality for
        tuples of genomic co-ordinates that are analogous to those
        available for genomic ranges in the GenomicRanges Bioconductor
        package.
URL: www.github.com/PeteHaitch/GenomicTuples
BugReports: https://github.com/PeteHaitch/GenomicTuples/issues
biocViews: Infrastructure, DataRepresentation, Sequencing
VignetteBuilder: knitr
Depends: R (>= 4.0), GenomicRanges (>= 1.37.4), Seqinfo, S4Vectors (>=
        0.17.25)
Imports: methods, BiocGenerics (>= 0.21.2), Rcpp (>= 0.11.2), IRanges
        (>= 2.19.13), data.table, stats4, stats, utils
Suggests: testthat, knitr, BiocStyle, rmarkdown, covr,
        GenomicAlignments, Biostrings, GenomeInfoDb
LinkingTo: Rcpp
License: Artistic-2.0
Collate: 'AllGenerics.R' 'AllUtilities.R' 'GTuples-class.R'
        'GTuples-comparison.R' 'GTuplesList-class.R' 'GenomicTuples.R'
        'RcppExports.R' 'coverage-methods.R' 'findOverlaps-methods.R'
        'inter-tuple-methods.R' 'intra-tuple-methods.R'
        'nearest-methods.R' 'setops-methods.R' 'tile-methods.R' 'zzz.R'
RoxygenNote: 7.3.2
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:39:57 UTC
RemoteUrl: https://github.com/bioc/GenomicTuples
RemoteRef: HEAD
RemoteSha: 63054408c857dec8c8cd20e2bece0e8d1c8122a8
NeedsCompilation: yes
Packaged: 2026-07-03 21:31:35 UTC; root
Author: Peter Hickey [aut, cre],
  Marcin Cieslik [ctb],
  Hervé Pagès [ctb]
Maintainer: Peter Hickey <peter.hickey@gmail.com>