Version: 0.99.0
Category: Pre-BioC submission
Text:

Version: 0.99.1
Category: Fixes for BioC submission
Text: notNMD is not required for vignettes

Version: 0.99.1
Category: Fixes for BioC submission
Text: whippet files are read in as a single object

Version: 0.99.1
Category: Fixes for BioC submission
Text: Fixed bug where leafcutter set creation snowballed

Version: 0.99.2
Text: Fix for fread()'ing in gzip files on windows

Version: 0.99.4
Text: Exon skipping and intron retention now works with manual
        coordinates again

Version: 0.99.4
Text: Documentation updates