NEWS

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GenVisR 1.4.8

• fixed bug in lolliplot introduced by ensembl server changes

GenVisR 1.4.7

• patch to fix possible conflicts between the rmvSilent=T and fileType="custom" parameter in waterfall()

GenVisR 1.4.6

• fixed typo with new feature in cnFreq

GenVisR 1.4.5

• fixed issue where plot would not render/take awhile for functions requiring a genome and using hg38
• Dramatically increased performance of cnFreq()
• cnFreq() no longer requires genomic segments to be identical across samples
• cnFreq() can now selectively plot chromosomes
• cnFreq() can now plot both frequency/proportion regardless of data input type

GenVisR 1.4.4

• fixed bug where incorrect cell labels were overlayed with proper ones when removing silent mutations

GenVisR 1.4.3

• fixed bug in cnFreq where cnFreq would produce an error (improperly) when looking for consistent windows

GenVisR 1.4.2

• fixed bug caused by updates to gridExtra when using genCov

GenVisR 1.4.1

• patch to fix alignments due to ggplot2 update

GenVisR 1.4.0

• Added new functionality to waterfall()
• Transitions and transverions can be plotted as a waterfall subplot
• mutation type proportions can now be plotted as a waterfall subplot
• minor bug fixes to waterfall