To cite package ‘GRaNIE’ in publications use:

  Arnold C, Zaugg J, Moussa R (2024). _GRaNIE: GRaNIE: Reconstruction
  cell type specific gene regulatory networks including enhancers using
  single-cell or bulk chromatin accessibility and RNA-seq data_. R
  package version 1.9.6, <https://bioconductor.org/packages/GRaNIE>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {GRaNIE: GRaNIE: Reconstruction cell type specific gene regulatory
networks including enhancers using single-cell or bulk
chromatin accessibility and RNA-seq data},
    author = {Christian Arnold and Judith Zaugg and Rim Moussa},
    year = {2024},
    note = {R package version 1.9.6},
    url = {https://bioconductor.org/packages/GRaNIE},
  }