NEWS

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GOfuncR 1.23.2

USER-LEVEL CHANGES

• Bugfix for compilation error on Mac
• Bugfix for refinement "signif" column (see https://github.com/sgrote/GOfuncR/pull/7)

GOfuncR 1.13.1

USER-LEVEL CHANGES

• update GO-graph (version 01-May-2021)

GOfuncR 1.7.1

USER-LEVEL CHANGES

• update GO-graph (version 23-Mar-2020)

GOfuncR 1.5.2

USER-LEVEL CHANGES

• update GO-graph (version 07-Oct-2019)

GOfuncR 1.5.1

NEW FEATURES

• add refine() function to restrict results from enrichment analysis to more specific categories

GOfuncR 1.3.4

USER-LEVEL CHANGES

• update GO-graph to weekly release (version 27-Mar-2019)
• fix issue with "~" as abbreviation for home directory in custom ontology path

GOfuncR 1.3.3

USER-LEVEL CHANGES

• update GO-graph (version 26-Mar-2019)

GOfuncR 1.1.5

USER-LEVEL CHANGES

• add name and domain to categories in get_anno_categories()
• update GO-graph (version 11-Oct-2018)

GOfuncR 1.1.2

NEW FEATURES

• allow for custom gene coordinates (alternative to default Bioconductor annotation packages; coordinates are used when the familiy-wise error rate is corrected for gene length or spatial clustering of genes)

USER-LEVEL CHANGES

• gene coordinates used in correction for gene-length or spatial clustering are not restricted to chromosomes 1-22,X,Y,MT anymore

GOfuncR 0.99.14

NEW FEATURES

• allow for custom annotations (alternative to default Bioconductor annotation packages)
• allow for custom ontology graph (alternative to default integrated GO-graph)

GOfuncR 0.99.12

USER-LEVEL CHANGES

• update GO-graph (version 10-Apr-2018)