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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "GNOSIS" in publications use:'
type: software
license: MIT
title: 'GNOSIS: Genomics explorer using statistical and survival analysis in R'
version: 1.3.0
doi: 10.12688/hrbopenres.13476.2
identifiers:
- type: doi
  value: 10.32614/CRAN.package.GNOSIS
abstract: GNOSIS incorporates a range of R packages enabling users to efficiently
  explore and visualise clinical and genomic data obtained from cBioPortal. GNOSIS
  uses an intuitive GUI and multiple tab panels supporting a range of functionalities.
  These include data upload and initial exploration, data recoding and subsetting,
  multiple visualisations, survival analysis, statistical analysis and mutation analysis,
  in addition to facilitating reproducible research.
authors:
- family-names: King
  given-names: Lydia
  email: l.king18@universityofgalway.ie
  orcid: https://orcid.org/0000-0002-0696-9811
preferred-citation:
  type: article
  title: 'GNOSIS: an R Shiny app supporting cancer genomics survival analysis with
    cBioPortal'
  authors:
  - family-names: King
    given-names: Lydia
    email: l.king18@universityofgalway.ie
    orcid: https://orcid.org/0000-0002-0696-9811
  - family-names: Flaus
    given-names: Andrew
  - family-names: Coughlan
    given-names: Simone
  - family-names: Holian
    given-names: Emma
  - family-names: Golden
    given-names: Aaron
  journal: HRB Open Res
  volume: '5'
  year: '2022'
  doi: 10.12688/hrbopenres.13476.2
  notes: 'PMID: 35677713'
  url: https://doi.org/10.12688/hrbopenres.13476.2
  start: '8'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/Lydia-King/GNOSIS
commit: c79d86778ce638c630717b2f63d460ce692962ea
url: https://github.com/Lydia-King/GNOSIS/
contact:
- family-names: King
  given-names: Lydia
  email: l.king18@universityofgalway.ie
  orcid: https://orcid.org/0000-0002-0696-9811