Package: GDSArray
Title: Representing GDS files as array-like objects
Version: 1.33.0
Authors@R: c(
    person("Qian", "Liu", email = "qliu7@buffalo.edu", role=c("aut")),
    person("Martin", "Morgan", role = c("aut")),
    person("Hervé",  "Pagès", role = c("aut")),
    person("Xiuwen", "Zheng", email = "zhengx@u.washington.edu", role = c("aut", "cre")))
Description: GDS files are widely used to represent genotyping or
        sequence data. The GDSArray package implements the `GDSArray`
        class to represent nodes in GDS files in a matrix-like
        representation that allows easy manipulation (e.g., subsetting,
        mathematical transformation) in _R_. The data remains on disk
        until needed, so that very large files can be processed.
biocViews: Infrastructure, DataRepresentation, Sequencing,
        GenotypingArray
Depends: R (>= 3.5), gdsfmt, methods, BiocGenerics, DelayedArray (>=
        0.5.32)
License: GPL-3
Encoding: UTF-8
URL: https://github.com/Bioconductor/GDSArray
BugReports: https://github.com/Bioconductor/GDSArray/issues
Imports: tools, S4Vectors (>= 0.17.34), SNPRelate, SeqArray
RoxygenNote: 7.3.1
VignetteBuilder: knitr
Suggests: testthat, knitr, markdown, rmarkdown, BiocStyle, BiocManager
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:47:39 UTC
RemoteUrl: https://github.com/bioc/GDSArray
RemoteRef: HEAD
RemoteSha: c911edac10f4ed992ac93a82b89b8355cfa64aea
NeedsCompilation: no
Packaged: 2026-07-04 23:07:15 UTC; root
Author: Qian Liu [aut],
  Martin Morgan [aut],
  Hervé Pagès [aut],
  Xiuwen Zheng [aut, cre]
Maintainer: Xiuwen Zheng <zhengx@u.washington.edu>