Package: FitHiC
Type: Package
Title: Confidence estimation for intra-chromosomal contact maps
Version: 1.39.0
Date: 2017-04-12
Authors@R: c(person("Ferhat", "Ay", role = "aut", comment =
        "Python original, https://noble.gs.washington.edu/proj/fit-hi-c/"),
    person(c("Timothy", "L."), "Bailey", role = "aut"),
    person(c("William", "S."), "Noble", role = "aut"),
    person("Ruyu", "Tan", role = c("aut", "cre", "trl"), comment =
        "R port", email = "rut003@ucsd.edu"))
Description: Fit-Hi-C is a tool for assigning statistical confidence
        estimates to intra-chromosomal contact maps produced by
        genome-wide genome architecture assays such as Hi-C.
License: GPL (>= 2)
biocViews: DNA3DStructure, Software
Imports: data.table, fdrtool, grDevices, graphics, Rcpp, stats, utils
LinkingTo: Rcpp
RoxygenNote: 5.0.1
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:44:17 UTC
RemoteUrl: https://github.com/bioc/FitHiC
RemoteRef: HEAD
RemoteSha: f0162be6b6925b8877f572082697b746d51d654a
NeedsCompilation: yes
Packaged: 2026-07-18 05:01:31 UTC; root
Author: Ferhat Ay [aut] (Python original,
    https://noble.gs.washington.edu/proj/fit-hi-c/),
  Timothy L. Bailey [aut],
  William S. Noble [aut],
  Ruyu Tan [aut, cre, trl] (R port)
Maintainer: Ruyu Tan <rut003@ucsd.edu>