# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "FindIT2" in publications use:'
type: software
license: Artistic-2.0
title: 'FindIT2: find influential TF and Target based on multi-omics data'
version: 1.11.0
doi: 10.1186/s12864-022-08506-8
identifiers:
- type: doi
  value: 10.32614/CRAN.package.FindIT2
abstract: 'This package implements functions to find influential TF and target based
  on different input type. It have five module: Multi-peak multi-gene annotaion(mmPeakAnno
  module), Calculate regulation potential(calcRP module), Find influential Target
  based on ChIP-Seq and RNA-Seq data(Find influential Target module), Find influential
  TF based on different input(Find influential TF module), Calculate peak-gene or
  peak-peak correlation(peakGeneCor module). And there are also some other useful
  function like integrate different source information, calculate jaccard similarity
  for your TF.'
authors:
- family-names: Shang
  given-names: Guandong
  email: shangguandong1996@163.com
  orcid: https://orcid.org/0000-0002-9509-0314
preferred-citation:
  type: article
  title: 'FindIT2: an R/Bioconductor package to identify influential transcription
    factor and targets based on multi-omics data'
  authors:
  - family-names: Shang
    given-names: Guandong
    email: shangguandong1996@163.com
    orcid: https://orcid.org/0000-0002-9509-0314
  - family-names: Xu
    given-names: Zhougeng
  - family-names: Wan
    given-names: Muchun
  - family-names: Wang
    given-names: Fuxiang
  - family-names: Wang
    given-names: Jiawei
  journal: BMC Genomics
  year: '2022'
  volume: '23'
  issue: S1
  url: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-022-08506-8
  doi: 10.1186/s12864-022-08506-8
  start: '272'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/shangguandong1996/FindIT2
commit: f4684990643a7e483d23cc03bd2a38d4a9c579be
url: https://support.bioconductor.org/t/FindIT2
contact:
- family-names: Shang
  given-names: Guandong
  email: shangguandong1996@163.com
  orcid: https://orcid.org/0000-0002-9509-0314