To cite package ‘FLAMES’ in publications use:

  Tian, L., Jabbari, J. S., Thijssen, R., et al. (2021). Comprehensive
  characterization of single-cell full-length isoforms in human and
  mouse with long-read sequencing. Genome Biology, 22(1), 310.
  https://doi.org/10.1186/s13059-021-02525-6

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Luyi Tian and Jafar S Jabbari and Rachel Thijssen and Quentin Gouil and Shanika L Amarasinghe and Oliver Voogd and Hasaru Kariyawasam and Mei R M Du and Jakob Schuster and Changqing Wang and Shian Su and Xueyi Dong and Charity W Law and Alexis Lucattini and Yair David Joseph Prawer and Coralina Collar-Fernández and Jin D Chung and Timur Naim and Audrey Chan and Chi Hai Ly and Gordon S Lynch and James G Ryall and Casey J A Anttila and Hongke Peng and Mary Ann Anderson and Christoffer Flensburg and Ian Majewski and Andrew W Roberts and David C S Huang and Michael B Clark and Matthew E Ritchie},
    title = {Comprehensive Characterization of Single-Cell Full-Length Isoforms in Human and Mouse with Long-Read Sequencing},
    journal = {Genome Biology},
    year = {2021},
    volume = {22},
    number = {1},
    pages = {310},
    doi = {10.1186/s13059-021-02525-6},
  }