Package: EMTscoreData
Title: Single-cell RNA-seq datasets of EMT responses from Cook et al.
        (2020)
Version: 1.1.0
Authors@R: c(person("Haimei", "Wen", email = "hudie.luoluo@gmail.com", role = c("aut", "cre"),
    comment = c(ORCID = "0009-0006-1600-1210")),
    person("Tian", "Hong",
           role = "fnd"))
Description: Provides 12 single-cell RNA-seq datasets profiling
        epithelial–mesenchymal transition (EMT) in human cancer cell
        lines (MCF7, OVCA420, DU145, and A549) under TGF-beta
        stimulation, kinase inhibition, and time-course conditions, as
        reported by Cook DP and Vanderhyden BC (2020). The datasets are
        distributed via ExperimentHub as SingleCellExperiment objects.
License: GPL-3
Imports: SummarizedExperiment, Seurat, SingleCellExperiment,
        AnnotationHub, ExperimentHub, ggplot2
Suggests: BiocFileCache, SeuratObject, knitr, rmarkdown, googledrive,
        BiocStyle, testthat (>= 3.0.0)
VignetteBuilder: knitr
biocViews: ExperimentHub, SingleCellData, ExpressionData, CancerData,
        RNASeqData
URL: https://github.com/wenmm/EMTscoreData
BugReports: https://github.com/wenmm/EMTscoreData/issues
Encoding: UTF-8
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-10-10 12:03:13 UTC; root
Config/testthat/edition: 3
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev python3 zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:38:15 UTC
RemoteUrl: https://github.com/bioc/EMTscoreData
RemoteRef: HEAD
RemoteSha: c9557df871515fc406201c60dcf1f6078de645e6
Author: Haimei Wen [aut, cre] (ORCID: <https://orcid.org/0009-0006-1600-1210>),
  Tian Hong [fnd]
Maintainer: Haimei Wen <hudie.luoluo@gmail.com>