# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ELMER" in publications use:'
type: software
license: GPL-3.0-only
title: 'ELMER: Inferring Regulatory Element Landscapes and Transcription Factor Networks
  Using Cancer Methylomes'
version: 2.29.0
doi: 10.1093/bioinformatics/bty902
identifiers:
- type: doi
  value: 10.32614/CRAN.package.ELMER
abstract: ELMER is designed to use DNA methylation and gene expression from a large
  number of samples to infere regulatory element landscape and transcription factor
  network in primary tissue.
authors:
- family-names: Chedraoui Silva
  given-names: Tiago
  email: tiagochst@gmail.com
- family-names: Yao
  given-names: Lijing
  email: lijingya@usc.edu
- family-names: Coetzee
  given-names: Simon
  email: Simon.Coetzee@cshs.org
- family-names: Farnham
  given-names: Peggy
- family-names: Berman
  given-names: Benjamin
preferred-citation:
  type: article
  title: 'ELMER v.2: An R/Bioconductor package to reconstruct gene regulatory networks
    from DNA methylation and transcriptome profiles'
  authors:
  - family-names: Silva
    given-names: Tiago Chedraoui
  - family-names: Coetzee
    given-names: Simon G
  - family-names: Gull
    given-names: Nicole
  - family-names: Yao
    given-names: Lijing
    email: lijingya@usc.edu
  - family-names: Hazelett
    given-names: Dennis J
  - family-names: Noushmehr
    given-names: Houtan
  - family-names: Lin
    given-names: De-Chen
  - family-names: Berman
    given-names: Benjamin P
  year: '2018'
  journal: Bioinformatics
  doi: 10.1093/bioinformatics/bty902
repository: https://bioc.r-universe.dev
commit: 80d0841bf7dcccac0863bb16b7efb1bf73eda7b0
contact:
- family-names: Chedraoui Silva
  given-names: Tiago
  email: tiagochst@gmail.com