Package: Dune
Title: Improving replicability in single-cell RNA-Seq cell type
        discovery
Version: 1.25.0
Authors@R: c(person("Hector", "Roux de Bezieux", role = c("aut", "cre"),
                   email = "hector.rouxdebezieux@berkeley.edu",
		   comment = c(ORCID = "0000-0002-1489-8339")),
	    person("Kelly","Street", role = "aut", email = "street.kelly@gmail.com"))
Description: Given a set of clustering labels, Dune merges pairs of
        clusters to increase mean ARI between labels, improving
        replicability.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Imports: BiocParallel, SummarizedExperiment, utils, ggplot2, dplyr,
        tidyr, RColorBrewer, magrittr, gganimate, purrr, aricode
Suggests: knitr, rmarkdown, testthat (>= 2.1.0)
VignetteBuilder: knitr
Depends: R (>= 3.6)
biocViews: Clustering, GeneExpression, RNASeq, Software, SingleCell,
        Transcriptomics, Visualization
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libicu-dev libssl-dev libproj-dev libsqlite3-dev
        libudunits2-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:52:09 UTC
RemoteUrl: https://github.com/bioc/Dune
RemoteRef: HEAD
RemoteSha: fe1bd1f623ab017495bee215425018c8b7efed05
NeedsCompilation: no
Packaged: 2026-07-04 00:52:53 UTC; root
Author: Hector Roux de Bezieux [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-1489-8339>),
  Kelly Street [aut]
Maintainer: Hector Roux de Bezieux <hector.rouxdebezieux@berkeley.edu>