Package: Doscheda
Type: Package
Title: A DownStream Chemo-Proteomics Analysis Pipeline
Version: 1.35.0
Author: Bruno Contrino, Piero Ricchiuto
Maintainer: Bruno Contrino <br1contrino@yahoo.co.uk>
Description: Doscheda focuses on quantitative chemoproteomics used to
        determine protein interaction profiles of small molecules from
        whole cell or tissue lysates using Mass Spectrometry data. The
        package provides a shiny application to run the pipeline,
        several visualisations and a downloadable report of an
        experiment.
License: GPL-3
Depends: R (>= 3.4)
Imports: methods, drc, stats, httr, jsonlite, reshape2 , vsn, affy,
        limma, stringr, ggplot2, graphics, grDevices, calibrate,
        corrgram, gridExtra, DT, shiny, shinydashboard, readxl,
        prodlim, matrixStats
biocViews: Proteomics, Normalization, Preprocessing, MassSpectrometry,
        QualityControl, DataImport, Regression
Suggests: BiocStyle, knitr, rmarkdown, testthat
VignetteBuilder: knitr
Encoding: UTF-8
LazyData: true
RoxygenNote: 6.0.1
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libssl-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:46:15 UTC
RemoteUrl: https://github.com/bioc/Doscheda
RemoteRef: HEAD
RemoteSha: ca63fa99cf512aa879fd17265b09dce3c405b3f8
NeedsCompilation: no
Packaged: 2026-07-03 15:30:19 UTC; root