Package: DominoEffect
Type: Package
Title: Identification and Annotation of Protein Hotspot Residues
Version: 1.33.0
Author: Marija Buljan and Peter Blattmann
Maintainer: Marija Buljan <marija.buljan.2@gmail.com>, Peter Blattmann
 <peter_blattmann@bluewin.ch>
Description: The functions support identification and annotation of
        hotspot residues in proteins. These are individual amino acids
        that accumulate mutations at a much higher rate than their
        surrounding regions.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Depends: R(>= 3.5)
Imports: biomaRt, data.table, utils, stats, Biostrings, pwalign,
        SummarizedExperiment, VariantAnnotation, AnnotationDbi,
        Seqinfo, IRanges, GenomicRanges, methods
Suggests: knitr, testthat, rmarkdown
RoxygenNote: 6.0.1
VignetteBuilder: knitr
biocViews: Software, SomaticMutation, Proteomics, SequenceMatching,
        Alignment
NeedsCompilation: no
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:47:19 UTC
RemoteUrl: https://github.com/bioc/DominoEffect
RemoteRef: HEAD
RemoteSha: cb54b0bac046a05e92795d293c1f1ffe3d9bb229
Packaged: 2026-07-04 13:51:31 UTC; root