To cite DifferentialRegulation in publications use:

  Simone Tiberi, Joel Meili, Peiying Cai, Charlotte Soneson, Dongze He,
  Hirak Sarkar, Alejandra Avalos-Pacheco, Rob Patro, Mark D. Robinson
  (2023). DifferentialRegulation: a Bayesian hierarchical approach to
  identify differentially regulated genes. bioRxiv. URL
  https://doi.org/10.1101/2023.08.17.553679

A BibTeX entry for LaTeX users is

  @Article{,
    title = {DifferentialRegulation: a Bayesian hierarchical approach to identify differentially regulated genes},
    author = {Simone Tiberi and Joel Meili and Peiying Cai and Charlotte Soneson and Dongze He and Hirak Sarkar and Alejandra Avalos-Pacheco and Rob Patro and Mark D. Robinson},
    eprint = {https://doi.org/10.1101/2023.08.17.553679},
    journal = {bioRxiv},
    year = {2023},
    doi = {10.1101/2023.08.17.553679},
    url = {https://doi.org/10.1101/2023.08.17.553679},
  }