Changes in version 1.7.1 o .gtf_parse function has been updated so overlapping exons are merged in total transcript Changes in version 1.3.4 o plot_coverage function has an option "samples" added to allow user to visualize a subset of samples. o fix a bug caused by NA values threshold for rho(<0.1) for scaling factor before degnorm core codes Changes in version 0.99.13 o bug fix and version bump. Changes in version 0.99.12 o version bump. Changes in version 0.99.11 o fix a bug in plot_coverage function and make changes in color scheme. Changes in version 0.99.10 o Made additional required changes from review Changes in version 0.99.9 o Made most required changes from review Changes in version 0.99.8 SUBMIT TO BIOCONDUCTOR FOR REVIEW o Corrected warnings and errors