Huuki-Myers LA, Maynard KR, Hicks SC, Zandi P, Kleinman JE, Hyde TM, Goes FS, Collado-Torres L (2026). DeconvoBuddies: a R/Bioconductor package with deconvolution helper functions. doi:10.18129/B9.bioc.DeconvoBuddies. https://github.com/LieberInstitute/DeconvoBuddies/DeconvoBuddies - R package version 1.5.0, http://www.bioconductor.org/packages/DeconvoBuddies.

Huuki-Myers LA, Montgomery KD, Kwon SH, Cinquemani S, Eagles NJ, Gonzalez-Padilla D, Maden SK, Kleinman JE, Hyde TM, Hicks SC, Maynard KR, Collado-Torres L (2025). “Benchmark of cellular deconvolution methods using a multi-assay dataset from postmortem human prefrontal cortex.” Genome Biol. doi:10.1186/s13059-025-03552-3. https://doi.org/10.1186/s13059-025-03552-3.

Corresponding BibTeX entries:

  @Manual{,
    title = {DeconvoBuddies: a R/Bioconductor package with
      deconvolution helper functions},
    author = {Louise A. Huuki-Myers and Kristen R. Maynard and
      Stephanie C. Hicks and Peter Zandi and Joel E. Kleinman and Tom
      M. Hyde and Fernando S. Goes and Leonardo Collado-Torres},
    year = {2026},
    url = {http://www.bioconductor.org/packages/DeconvoBuddies},
    note =
      {https://github.com/LieberInstitute/DeconvoBuddies/DeconvoBuddies
      - R package version 1.5.0},
    doi = {10.18129/B9.bioc.DeconvoBuddies},
  }

  @Article{,
    title = {Benchmark of cellular deconvolution methods using a
      multi-assay dataset from postmortem human prefrontal cortex},
    author = {Louise A. Huuki-Myers and Kelsey D. Montgomery and Sang
      Ho Kwon and Sophia Cinquemani and Nicholas J. Eagles and Daianna
      Gonzalez-Padilla and Sean K. Maden and Joel E. Kleinman and
      Thomas M. Hyde and Stephanie C. Hicks and Kristen R. Maynard and
      Leonardo Collado-Torres},
    year = {2025},
    journal = {Genome Biol},
    doi = {10.1186/s13059-025-03552-3},
    url = {https://doi.org/10.1186/s13059-025-03552-3},
  }