Package: DaparToolshedData
Type: Package
Title: Data accompanying the DaparToolshed and Prostar 2 packages
Version: 0.99.21
Date: 2026-07-17
Authors@R: 
  c(person(given = "Samuel", 
      family = "Wieczorek",
      email = "samuel.wieczorek@cea.fr", 
      role = c("aut","cre"),
      comment = c(ORCID="0000-0002-5016-1203")),
  person(given = "Enora", 
      family ="Fremy",
      role = c("aut"))
      )
Description: Mass-spectrometry based UPS proteomics data sets from
        Ramus C, Hovasse A, Marcellin M, Hesse AM, Mouton-Barbosa E,
        Bouyssie D, Vaca S, Carapito C, Chaoui K, Bruley C, Garin J,
        Cianferani S, Ferro M, Dorssaeler AV, Burlet-Schiltz O,
        Schaeffer C, Coute Y, Gonzalez de Peredo A. Spiked proteomic
        standard dataset for testing label-free quantitative software
        and statistical methods. Data Brief. 2015 Dec 17;6:286-94 and
        Giai Gianetto, Q., Combes, F., Ramus, C., Bruley, C., Coute,
        Y., Burger, T. (2016). Calibration plot for proteomics: A
        graphical tool to visually check the assumptions underlying FDR
        control in quantitative experiments. Proteomics, 16(1), 29-32.
Suggests: rmarkdown, BiocStyle, testthat, knitr
Depends: R (>= 4.5.0)
Imports: S4Vectors, utils, QFeatures, ExperimentHub, AnnotationHub
Collate: doc-data.R get-data.R zzz.R DaparToolshedData.R
License: GPL-2
biocViews: ExperimentData, ExperimentHub, MassSpectrometryData
NeedsCompilation: no
Packaged: 2026-10-15 11:33:19 UTC; root
Encoding: UTF-8
URL: https://github.com/edyp-lab/DaparToolshedData,
        https://edyp-lab.github.io/DaparToolshedData/
BugReports: https://github.com/edyp-lab/DaparToolshedData/issues
VignetteBuilder: knitr
StagedInstall: no
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libpng-dev
        libuv1-dev libxml2-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-07-17 08:23:45 UTC
RemoteUrl: https://github.com/bioc/DaparToolshedData
RemoteRef: HEAD
RemoteSha: c57c84c02c872ff6a83359ff3775b598169f8287
Author: Samuel Wieczorek [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-5016-1203>),
  Enora Fremy [aut]
Maintainer: Samuel Wieczorek <samuel.wieczorek@cea.fr>