Hao Wu, Chi Wang, Zhijin Wu (2013): A new shrinkage estimator for dispersion improves differential expression detection in RNA-seq data. Biostatistics, 14(2):232-43.<doi:10.1093/biostatistics/kxs033>

Hao Feng, Karen Conneely, Hao Wu (2014): A bayesian hierarchical model to detect differentially methylated loci from single nucleotide resolution sequencing data. Nucleic acids research, 42(8):e69.<doi:10.1093/nar/gku154>

Hao Wu, Tianlei Xu, Hao Feng, Li Chen, Ben Li, Bing Yao, Zhaohui Qin, Peng Jin and Karen N. Conneely (2015): Detection of differentially methylated regions from whole-genome bisulfite sequencing data without replicates. Nucleic acids research.<doi:10.1093/nar/gkv715>

Yongseok Park, Hao Wu(2016): Differential methylation analysis for BS-seq data under general experimental design. Bioinformatics.<doi:10.1093/bioinformatics/btw026>

Corresponding BibTeX entries:

  @Article{,
    title = {A new shrinkage estimator for dispersion improves
      differential expression detection in RNA-seq data},
    author = {Hao Wu and Chi Wang and Zhijin Wu},
    year = {2013},
    journal = {Biostatistics},
    doi = {10.1093/biostatistics/kxs033},
  }

  @Article{,
    title = {A bayesian hierarchical model to detect differentially
      methylated loci from single nucleotide resolution sequencing
      data.},
    author = {Hao Feng and Karen Conneely and Hao Wu},
    year = {2014},
    journal = {Nucleic acids research},
    doi = {10.1093/nar/gku154},
  }

  @Article{,
    title = {Detection of differentially methylated regions from
      whole-genome bisulfite sequencing data without replicates.},
    author = {Hao Wu and Tianlei Xu and Hao Feng and Li Chen and Ben Li
      and Bing Yao and Zhaohui Qin and Peng Jin and Karen Conneely},
    year = {2015},
    journal = {Nucleic acids research},
    doi = {doi: 10.1093/nar/gkv715},
  }

  @Article{,
    title = {Differential methylation analysis for BS-seq data under
      general experimental design},
    author = {Yongseok Park and Hao Wu},
    year = {2016},
    journal = {Bioinformatics},
    doi = {10.1093/bioinformatics/btw026},
  }