NEWS

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DNAshapeR 0.99.8

• Added additional 9 DNA shape features, 1 biophysical feature, and 4 methylated DNA shape features

DNAshapeR 0.99.7

• improved the performace of sequence encoding process.

DNAshapeR 0.99.6

• corrected the terms of BioView in DESCRIPTION.

DNAshapeR 0.99.5

• Upgraded R dependency version to 3.3.
• Added importFrom methods in NAMESPACE.

DNAshapeR 0.99.4

• Added caret package to the SUGGESTIONS in DESCRIPTION.

DNAshapeR 0.99.3

• Fixed warnings from R CMD Check.
• Evaluated more vignette chunks.

DNAshapeR 0.99.1

• Added documentation for the normalizeShape function. A manual entry is now also available for most non-exported functions.
• Added citation entry.

DNAshapeR 0.99.0

• normalization parameter in encodeSeqShape.R changed to normalize.
• The y-axis plot range in plotShape can now be defined by the user.
• Completed package documentation.
• DNA shape feature matrix returned by encodeSeqShape is now normalized by default.