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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "DIAlignR" in publications use:'
type: software
license: GPL-3.0-only
title: 'DIAlignR: Dynamic Programming Based Alignment of MS2 Chromatograms'
version: 2.13.0
abstract: To obtain unbiased proteome coverage from a biological sample, mass-spectrometer
  is operated in Data Independent Acquisition (DIA) mode. Alignment of these DIA runs
  establishes consistency and less missing values in complete data-matrix. This package
  implements dynamic programming with affine gap penalty based approach for pair-wise
  alignment of analytes. A hybrid approach of global alignment (through MS2 features)
  and local alignment (with MS2 chromatograms) is implemented in this tool.
authors:
- family-names: Gupta
  given-names: Shubham
  email: shubham.1637@gmail.com
  orcid: https://orcid.org/0000-0003-3500-8152
- family-names: Rost
  given-names: Hannes
  email: hannes.rost@utoronto.ca
  orcid: https://orcid.org/0000-0003-0990-7488
- family-names: Sing
  given-names: Justin
  email: justincsing@gmail.com
repository: https://bioc.r-universe.dev
repository-code: https://github.com/shubham1637/DIAlignR
url: https://github.com/shubham1637/DIAlignR
contact:
- family-names: Gupta
  given-names: Shubham
  email: shubham.1637@gmail.com
  orcid: https://orcid.org/0000-0003-3500-8152