Changes in version 1.2.0 (2011-03-23) o Added support of NCI networks through the NCIgraph package. o Updated the man page of the Loi2008 data. Changes in version 0.3.3 (2010-10-08) o Now validating 'verbose' argument in all functions. Changes in version 0.3.2 (2010-09-28) o Updated dependencies. o Passes R CMD check with no warning with R 2.11.1 and R-alpha. Changes in version 0.3.1 (2010-09-25) o Fixed hypergeometric test in demo/Loi2008.R. Changes in version 0.3.0 (2010-09-24) o Passes R CMD check with no warning with R 2.11.1. Changes in version 0.2.3 (2010-09-23) o Added examples. o Added a vignette. Changes in version 0.2.2 (2010-09-23) o Updated dependencies. Changes in version 0.2.1 (2010-09-23) o Package passes R CMD check with no warning with R version 2.11.1. o "(AN|BS).test" now return an object of class "htest". Changes in version 0.2.0 (2010-09-22) o Updated dependencies: removed 'matlab' and 'evd'. o Added a NAMESPACE. Changes in version 0.1.4 (2010-09-17) o Now plotting NCBI gene IDs in Loi2008 demo. o Updated documentation. Changes in version 0.1.3 (2010-09-16) o Now defining smoothness in terms of proximity of one node's expression to the average expression of its neighbors. o Added 'plotValuedGraph'. Changes in version 0.1.2 (2010-09-14) o Added inst/downloadScripts to download xml data from KEGG and expression data (Loi 2008). Changes in version 0.1.1 (2010-09-13) o Added inst/demoScripts. Changes in version 0.1.0 (2010-09-01) o Created.