NEWS

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DEGraph 1.2.0 (2011-03-23)

• Added support of NCI networks through the NCIgraph package.
• Updated the man page of the Loi2008 data.

DEGraph 0.3.3 (2010-10-08)

• Now validating 'verbose' argument in all functions.

DEGraph 0.3.2 (2010-09-28)

• Updated dependencies.
• Passes R CMD check with no warning with R 2.11.1 and R-alpha.

DEGraph 0.3.1 (2010-09-25)

• Fixed hypergeometric test in demo/Loi2008.R.

DEGraph 0.3.0 (2010-09-24)

• Passes R CMD check with no warning with R 2.11.1.

DEGraph 0.2.3 (2010-09-23)

• Added examples.
• Added a vignette.

DEGraph 0.2.2 (2010-09-23)

• Updated dependencies.

DEGraph 0.2.1 (2010-09-23)

• Package passes R CMD check with no warning with R version 2.11.1.
• "(AN|BS).test" now return an object of class "htest".

DEGraph 0.2.0 (2010-09-22)

• Updated dependencies: removed 'matlab' and 'evd'.
• Added a NAMESPACE.

DEGraph 0.1.4 (2010-09-17)

• Now plotting NCBI gene IDs in Loi2008 demo.
• Updated documentation.

DEGraph 0.1.3 (2010-09-16)

• Now defining smoothness in terms of proximity of one node's expression to the average expression of its neighbors.
• Added 'plotValuedGraph'.

DEGraph 0.1.2 (2010-09-14)

• Added inst/downloadScripts to download xml data from KEGG and expression data (Loi 2008).

DEGraph 0.1.1 (2010-09-13)

• Added inst/demoScripts.

DEGraph 0.1.0 (2010-09-01)

• Created.