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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "CytoGLMM" in publications use:'
type: software
license: LGPL-3.0-only
title: 'CytoGLMM: Conditional Differential Analysis for Flow and Mass Cytometry Experiments'
version: 1.13.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.CytoGLMM
abstract: 'The CytoGLMM R package implements two multiple regression strategies: A
  bootstrapped generalized linear model (GLM) and a generalized linear mixed model
  (GLMM). Most current data analysis tools compare expressions across many computationally
  discovered cell types. CytoGLMM focuses on just one cell type. Our narrower field
  of application allows us to define a more specific statistical model with easier
  to control statistical guarantees. As a result, CytoGLMM finds differential proteins
  in flow and mass cytometry data while reducing biases arising from marker correlations
  and safeguarding against false discoveries induced by patient heterogeneity.'
authors:
- family-names: Seiler
  given-names: Christof
  email: christof.seiler@maastrichtuniversity.nl
  orcid: https://orcid.org/0000-0001-8802-3642
preferred-citation:
  type: article
  title: 'CytoGLMM: Conditional Differential Analysis for Flow and Mass Cytometry
    Experiments'
  authors:
  - family-names: Seiler
    given-names: Christof
    email: christof.seiler@maastrichtuniversity.nl
    orcid: https://orcid.org/0000-0001-8802-3642
  - family-names: Ferreira
    given-names: Anne-Maud
  - family-names: Kronstad
    given-names: Lisa M
  - family-names: Simpson
    given-names: Laura J
  - family-names: Le Gars
    given-names: Mathieu
  - family-names: Vendrame
    given-names: Elena
  - family-names: Blish
    given-names: Catherine A
  - family-names: Holmes
    given-names: Susan
  journal: BMC Bioinformatics
  volume: '22'
  issue: '137'
  year: '2021'
  start: '1'
  end: '14'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/ChristofSeiler/CytoGLMM
commit: 8559ef8c8d4942533bc1c7c0541f51e93c1a030e
url: https://christofseiler.github.io/CytoGLMM
contact:
- family-names: Seiler
  given-names: Christof
  email: christof.seiler@maastrichtuniversity.nl
  orcid: https://orcid.org/0000-0001-8802-3642