To cite package ‘Cogito’ in publications use:

  Bürger A (2022). _Cogito: Compare genomic intervals tool - Automated,
  complete, reproducible and clear report about genomic and epigenomic
  data sets_. R package version 1.11.0,
  <https://bioconductor.org/packages/Cogito>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {Cogito: Compare genomic intervals tool - Automated, complete,
reproducible and clear report about genomic and epigenomic data
sets},
    author = {Annika Bürger},
    year = {2022},
    note = {R package version 1.11.0},
    url = {https://bioconductor.org/packages/Cogito},
  }