Package: ChIPXpress
Type: Package
Title: ChIPXpress: enhanced transcription factor target gene
        identification from ChIP-seq and ChIP-chip data using publicly
        available gene expression profiles
Version: 1.57.1
Date: 2012-12-09
Author: George Wu
Maintainer: George Wu <georgetwu@gmail.com>
Description: ChIPXpress takes as input predicted TF bound genes from
        ChIPx data and uses a corresponding database of gene expression
        profiles downloaded from NCBI GEO to rank the TF bound targets
        in order of which gene is most likely to be functional TF
        target.
License: GPL(>=2)
LazyLoad: yes
Imports: Biobase, GEOquery, frma, affy, bigmemory, biganalytics
Depends: R (>= 2.10), ChIPXpressData
Suggests: mouse4302frmavecs, mouse4302.db, mouse4302cdf, RUnit,
        BiocGenerics
Packaged: 2026-05-29 22:01:37 UTC; root
biocViews: ChIPchip, ChIPSeq
Config/Bioconductor/UnsupportedPlatforms: windows
Config/pak/sysreqs: libicu-dev libxml2-dev libssl-dev libx11-dev
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-05-29 18:37:18 UTC
RemoteUrl: https://github.com/bioc/ChIPXpress
RemoteRef: HEAD
RemoteSha: 36af3a0e31b0dc036c9964eebabfd65182719320
NeedsCompilation: no