Package: CellMixS
Type: Package
Title: Evaluate Cellspecific Mixing
Version: 1.29.0
Authors@R: c(person("Almut", "Lütge", role = c("aut", "cre"), email = "almut.lue@gmail.com"))
Description: CellMixS provides metrics and functions to evaluate batch
        effects, data integration and batch effect correction in single
        cell trancriptome data with single cell resolution. Results can
        be visualized and summarised on different levels, e.g. on cell,
        celltype or dataset level.
License: GPL (>=2)
Imports: BiocNeighbors, ggplot2, scater, viridis, cowplot,
        SummarizedExperiment, SingleCellExperiment, tidyr, magrittr,
        dplyr, ggridges, stats, purrr, methods, BiocParallel,
        BiocGenerics
Depends: kSamples, R (>= 4.0)
biocViews: SingleCell, Transcriptomics, GeneExpression, BatchEffect
BugReports: https://github.com/almutlue/CellMixS/issues
URL: https://github.com/almutlue/CellMixS
Encoding: UTF-8
RoxygenNote: 7.1.1
VignetteBuilder: knitr
Suggests: BiocStyle, knitr, rmarkdown, testthat, limma, Rtsne
Config/pak/sysreqs: libicu-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:49:55 UTC
RemoteUrl: https://github.com/bioc/CellMixS
RemoteRef: HEAD
RemoteSha: 6646f69b26f056e203a5551e6d0abed2c0ad73a4
NeedsCompilation: no
Packaged: 2026-07-03 20:14:30 UTC; root
Author: Almut Lütge [aut, cre]
Maintainer: Almut Lütge <almut.lue@gmail.com>