Package: CSSQ
Title: Chip-seq Signal Quantifier Pipeline
Version: 1.25.0
Author: Ashwath Kumar [aut], Michael Y Hu [aut], Yajun Mei [aut],
        Yuhong Fan [aut]
Maintainer: Fan Lab at Georgia Institute of Technology
 <yuhong.fan@biology.gatech.edu>
Description: This package is desgined to perform statistical analysis
        to identify statistically significant differentially bound
        regions between multiple groups of ChIP-seq dataset.
License: Artistic-2.0
Encoding: UTF-8
biocViews: ChIPSeq, DifferentialPeakCalling, Sequencing, Normalization
Depends: SummarizedExperiment, GenomicRanges, IRanges, S4Vectors,
        rtracklayer
Imports: GenomicAlignments, GenomicFeatures, Rsamtools, ggplot2,
        grDevices, stats, utils
Suggests: BiocStyle, knitr, rmarkdown, markdown
VignetteBuilder: knitr
RoxygenNote: 7.0.0
Config/pak/sysreqs: make libbz2-dev liblzma-dev libpng-dev libxml2-dev
        libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:51:31 UTC
RemoteUrl: https://github.com/bioc/CSSQ
RemoteRef: HEAD
RemoteSha: 22f37523ca9536381994b547dee3e1fc335a3d5e
NeedsCompilation: no
Packaged: 2026-07-15 05:24:56 UTC; root