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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "CLAMP" in publications use:'
type: software
license: GPL-3.0-only
title: 'CLAMP: Curated Latent-variable Analysis with Molecular Priors'
version: 0.99.3
abstract: CLAMP performs prior-informed latent variable decomposition of high-dimensional
  transcriptomic data. It integrates curated gene sets to learn biologically interpretable
  latent variables, supports file-backed matrices for large datasets, and provides
  tools for preprocessing, normalization, projection, and evaluation of latent structures.
  CLAMP is designed to scale to tens of thousands of samples, making it suitable for
  large public resources such as recount3 and ARCHS4. It enables researchers to uncover
  biologically meaningful patterns that connect genes, pathways, and complex traits
  in transcriptomics studies.
authors:
- family-names: Subirana-Granes
  given-names: Marc
  email: mb2subi@gmail.com
  orcid: https://orcid.org/0000-0003-3934-839X
- family-names: Chikina
  given-names: Maria
  email: mchikina@gmail.com
repository: https://bioc.r-universe.dev
repository-code: https://github.com/chikinalab/CLAMP
commit: 1768d3b1bc1ed9f6c7029ca870f5b013c191aee0
url: https://chikinalab.github.io/CLAMP/
date-released: '2026-06-08'
contact:
- family-names: Subirana-Granes
  given-names: Marc
  email: mb2subi@gmail.com
  orcid: https://orcid.org/0000-0003-3934-839X