# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "CINdex" in publications use:' type: software license: GPL-2.0-or-later title: 'CINdex: Chromosome Instability Index' version: 1.33.0 abstract: The CINdex package addresses important area of high-throughput genomic analysis. It allows the automated processing and analysis of the experimental DNA copy number data generated by Affymetrix SNP 6.0 arrays or similar high throughput technologies. It calculates the chromosome instability (CIN) index that allows to quantitatively characterize genome-wide DNA copy number alterations as a measure of chromosomal instability. This package calculates not only overall genomic instability, but also instability in terms of copy number gains and losses separately at the chromosome and cytoband level. authors: - family-names: Song given-names: Lei email: polosong@gmail.com - family-names: Bhuvaneshwar given-names: Krithika email: kb472@georgetown.edu - family-names: Wang given-names: Yue - family-names: Feng given-names: Yuanjian - family-names: Shih given-names: Ie-Ming - family-names: Madhavan given-names: Subha email: yg63@georgetown.edu - family-names: Gusev given-names: Yuriy email: yg63@georgetown.edu repository: https://bioc.r-universe.dev date-released: '2020-10-27' contact: - family-names: Gusev given-names: Yuriy email: yg63@georgetown.edu