Package: CBNplot Type: Package Title: plot bayesian network inferred from gene expression data based on enrichment analysis results Version: 1.13.0 Authors@R: person("Noriaki", "Sato", email = "nori@hgc.jp", role = c("cre", "aut")) Description: This package provides the visualization of bayesian network inferred from gene expression data. The networks are based on enrichment analysis results inferred from packages including clusterProfiler and ReactomePA. The networks between pathways and genes inside the pathways can be inferred and visualized. License: Artistic-2.0 Encoding: UTF-8 Depends: R (>= 4.3.0) Imports: ggplot2, magrittr, graphite, ggraph, igraph, bnlearn (>= 4.7), patchwork, org.Hs.eg.db, clusterProfiler, utils, enrichplot, reshape2, ggforce, dplyr, tidyr, stringr, depmap, ExperimentHub, Rmpfr, graphlayouts, BiocFileCache, ggdist, purrr, pvclust, stats, rlang Suggests: knitr, arules, concaveman, ReactomePA, bnviewer, rmarkdown, withr, BiocStyle, testthat (>= 3.0.0) biocViews: Visualization, Bayesian, GeneExpression, NetworkInference, Pathways, Reactome, Network, NetworkEnrichment, GeneSetEnrichment VignetteBuilder: knitr RoxygenNote: 7.3.2 URL: https://github.com/noriakis/CBNplot BugReports: https://github.com/noriakis/CBNplot/issues Config/testthat/edition: 3 Config/pak/sysreqs: libcairo2-dev cmake libfontconfig1-dev libfreetype6-dev libglpk-dev libgmp3-dev make libicu-dev libpng-dev libuv1-dev libxml2-dev libmpfr-dev libssl-dev zlib1g-dev Repository: https://bioc.r-universe.dev Date/Publication: 2026-04-28 13:00:34 UTC RemoteUrl: https://github.com/bioc/CBNplot RemoteRef: HEAD RemoteSha: f25914628596658b9f76a2c56bedfde3bfa9a0f8 NeedsCompilation: no Packaged: 2026-07-04 14:12:24 UTC; root Author: Noriaki Sato [cre, aut] Maintainer: Noriaki Sato