# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "CATALYST" in publications use:'
type: software
title: 'CATALYST: Cytometry dATa anALYSis Tools'
version: 1.29.1
doi: 10.32614/CRAN.package.CATALYST
abstract: CATALYST provides tools for preprocessing of and differential discovery
  in cytometry data such as FACS, CyTOF, and IMC. Preprocessing includes i) normalization
  using bead standards, ii) single-cell deconvolution, and iii) bead-based compensation.
  For differential discovery, the package provides a number of convenient functions
  for data processing (e.g., clustering, dimension reduction), as well as a suite
  of visualizations for exploratory data analysis and exploration of results from
  differential abundance (DA) and state (DS) analysis in order to identify differences
  in composition and expression profiles at the subpopulation-level, respectively.
authors:
- family-names: Crowell
  given-names: Helena L.
  email: helena@crowell.eu
  orcid: https://orcid.org/0000-0002-4801-1767
- family-names: Zanotelli
  given-names: Vito R.T.
  orcid: https://orcid.org/0000-0001-7268-311X
- family-names: Chevrier
  given-names: Stéphane
  orcid: https://orcid.org/0000-0002-9216-7910
- family-names: Robinson
  given-names: Mark D.
  orcid: https://orcid.org/0000-0002-3048-5518
repository: https://bioc.r-universe.dev
repository-code: https://github.com/HelenaLC/CATALYST
commit: 17fb2cb46c386084e5004a46f110f21368ce10dc
url: https://github.com/HelenaLC/CATALYST
contact:
- family-names: Crowell
  given-names: Helena L.
  email: helena@crowell.eu
  orcid: https://orcid.org/0000-0002-4801-1767