To cite package ‘CARNIVAL’ in publications use:

  Gjerga E, Trairatphisan P, Liu A, Valdeolivas A, Peschke N, Dugourd
  A, Gabor A, Ivanova O (2024). _CARNIVAL_.
  doi:10.18129/B9.bioc.CARNIVAL
  <https://doi.org/10.18129/B9.bioc.CARNIVAL>,
  https://github.com/saezlab/CARNIVAL/CARNIVAL - R package version
  2.15.0, <http://www.bioconductor.org/packages/CARNIVAL>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {CARNIVAL},
    author = {Enio Gjerga and Panuwat Trairatphisan and Anika Liu and Alberto Valdeolivas and Nikolas Peschke and Aurelien Dugourd and Attila Gabor and Olga Ivanova},
    year = {2024},
    url = {http://www.bioconductor.org/packages/CARNIVAL},
    note = {https://github.com/saezlab/CARNIVAL/CARNIVAL - R package version 2.15.0},
    doi = {10.18129/B9.bioc.CARNIVAL},
  }

  Liu A, Trairatphisan P, Gjerga E, Didangelos A, Barratt J,
  Saez-Rodriguez J (2019). “From expression footprints to causal
  pathways: contextualizing large signaling networks with CARNIVAL.”
  _npj Syst Biol Appl_. doi:10.1038/s41540-019-0118-z
  <https://doi.org/10.1038/s41540-019-0118-z>,
  <https://www.nature.com/articles/s41540-019-0118-z>.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {From expression footprints to causal pathways: contextualizing large signaling networks with CARNIVAL},
    author = {Anika Liu and Panuwat Trairatphisan and Enio Gjerga and Athanasios Didangelos and Jonathan Barratt and Julio Saez-Rodriguez},
    year = {2019},
    journal = {npj Syst Biol Appl},
    doi = {10.1038/s41540-019-0118-z},
    url = {https://www.nature.com/articles/s41540-019-0118-z},
  }