To cite BreastSubtypeR, please use the following references.

Yang Q, Hartman J, Sifakis E (2025). “BreastSubtypeR: a unified R/Bioconductor package for intrinsic molecular subtyping in breast cancer research.” NAR Genomics and Bioinformatics, 7(4), lqaf131. doi:10.1093/nargab/lqaf131. https://doi.org/10.1093/nargab/lqaf131.

Yang Q, Sifakis E (2026). BreastSubtypeR: Cohort-aware methods for intrinsic molecular subtyping of breast cancer. R package version 1.5.0, https://doi.org/10.18129/B9.bioc.BreastSubtypeR.

Corresponding BibTeX entries:

  @Article{,
    title = {BreastSubtypeR: a unified R/Bioconductor package for
      intrinsic molecular subtyping in breast cancer research},
    author = {Qiao Yang and Johan Hartman and Emmanouil G. Sifakis},
    journal = {NAR Genomics and Bioinformatics},
    year = {2025},
    volume = {7},
    number = {4},
    pages = {lqaf131},
    doi = {10.1093/nargab/lqaf131},
    url = {https://doi.org/10.1093/nargab/lqaf131},
  }

  @Manual{,
    title = {BreastSubtypeR: Cohort-aware methods for intrinsic
      molecular subtyping of breast cancer},
    author = {Qiao Yang and Emmanouil G. Sifakis},
    year = {2026},
    note = {R package version 1.5.0},
    url = {https://doi.org/10.18129/B9.bioc.BreastSubtypeR},
  }