Package: BiocBook
Title: Write, containerize, publish and version Quarto books with
        Bioconductor
Description: A BiocBook can be created by authors (e.g. R developers,
        but also scientists, teachers, communicators, ...) who wish to
        1) write (compile a body of biological and/or bioinformatics
        knowledge), 2) containerize (provide Docker images to reproduce
        the examples illustrated in the compendium), 3) publish (deploy
        an online book to disseminate the compendium), and 4) version
        (automatically generate specific online book versions and
        Docker images for specific Bioconductor releases).
Version: 1.11.4
Date: 2023-08-03
Authors@R: 
    person(
        "Jacques", "Serizay", , "jacquesserizay@gmail.com", 
        role = c("aut", "cre")
    )
URL: https://bioconductor.org/packages/BiocBook
BugReports: https://github.com/js2264/BiocBook/issues
Depends: R (>= 4.3)
Imports: BiocGenerics, desc, digest, pak, cli, glue, gert, gh,
        gitcreds, httr, usethis, dplyr, purrr, tibble, methods,
        rprojroot, reticulate, stringr, yaml, tools, utils, rlang,
        quarto, renv
Suggests: BiocManager, BiocStyle, knitr, testthat (>= 3.0.0), rmarkdown
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
biocViews: Infrastructure, ReportWriting, Software
VignetteBuilder: knitr
License: MIT + file LICENSE
Collate: 'doc.R' 'imports.R' 'init.R' 'BiocBook.R' 'BiocBook-methods.R'
        'bookdown.R' 'check.R' 'editing.R' 'globals.R' 'llms.R'
        'micromamba.R' 'pages.R' 'python.R' 'utils.R'
Config/testthat/edition: 3
Config/pak/sysreqs: cmake git make libgit2-dev libicu-dev libpng-dev
        libuv1-dev libssl-dev python3 libx11-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-10-05 09:53:33 UTC
RemoteUrl: https://github.com/bioc/BiocBook
RemoteRef: HEAD
RemoteSha: 15e8d15ab3cb31005512d1058337a4c82029d725
NeedsCompilation: no
Packaged: 2026-10-11 13:10:45 UTC; root
Author: Jacques Serizay [aut, cre]
Maintainer: Jacques Serizay <jacquesserizay@gmail.com>