Package: BamScale
Type: Package
Title: Bioconductor-Friendly Multithreaded BAM Processing
Version: 0.99.14
Authors@R: c(
    person("Chirag", "Parsania", email = "chirag.parsania@gmail.com", role = c("aut", "cre"))
  )
Description: Multithreaded sequential BAM processing built on top of
        the ompBAM C++ engine. BamScale provides user-friendly BAM read
        and scan interfaces designed for compatibility with existing
        Bioconductor workflows.
License: MIT + file LICENSE
biocViews: Software, DataImport, Sequencing, Coverage, Alignment,
        QualityControl
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Imports: BiocGenerics, BiocParallel, Biostrings, GenomeInfoDb,
        GenomicAlignments, GenomicRanges, IRanges, methods, ompBAM,
        Rcpp, Rsamtools, S4Vectors
LinkingTo: Rcpp, ompBAM, S4Vectors, IRanges, XVector
Suggests: BiocStyle, chipseqDBData, dplyr, ExperimentHub, ggplot2,
        knitr, readr, rmarkdown, rtracklayer, scales, tibble, testthat
        (>= 3.0.0), tidyr
VignetteBuilder: knitr
Config/testthat/edition: 3
SystemRequirements: C++17, OpenMP
NeedsCompilation: yes
URL: https://cparsania.github.io/BamScale/
BugReports: https://github.com/cparsania/BamScale/issues
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libbz2-dev liblzma-dev libssl-dev xz-utils
        zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-08-13 04:50:17 UTC
RemoteUrl: https://github.com/bioc/BamScale
RemoteRef: HEAD
RemoteSha: 39795de37096adadd8a8b44773b097576aef2df6
Packaged: 2026-10-15 11:02:56 UTC; root
Author: Chirag Parsania [aut, cre]
Maintainer: Chirag Parsania <chirag.parsania@gmail.com>