Changes in version 2.27.1 (2026-01-02)                 

    o   migration from dependency futile.logger to logger

                 Changes in version 2.13.2 (2022-09-21)                 

    o   fixed issue with tests

    o   fixed issue with folders

                 Changes in version 2.11.1 (2022-03-31)                 

    o   replaced dependency outliers with dixonTest

                 Changes in version 2.7.1 (2020-11-03)                  

    o   fixed some warnings from R Check and BiocCheck

                 Changes in version 2.3.1 (2020-03-18)                  

    o   added helpful output in case the gradient descent diverges

                 Changes in version 2.1.4 (2019-05-17)                  

    o   minor changes

                 Changes in version 2.1.3 (2019-05-13)                  

    o   Performance improvments
	o regarding function calcSummary
	o and calcScore 

                 Changes in version 2.1.2 (2019-05-10)                  

    o   New feature
	o y-axis in boxplot function can now be logged

                 Changes in version 2.1.1 (2019-05-09)                  

    o   New feature
	o Implementation of outlier detection

                 Changes in version 2.0.0 (2019-04-30)                  

    o   Code refactoring
	o Simplification of the source code
	o Changes to the API
	o Extraction of the preprocessing function
	o loss function is now exported
	o renaming of functions
	o Combination of calcPvals and calcMedians methods into one

    o   Documentation
	o Update of the README
	o New Vignette

    o   Serial execution of the methods is now the default

    o   Performance improvments
	o Usage of RCPP for further performance improvements

    o   Change from GPL-2 to GPL-3 license

    o   Removing of deprecated functions

    o   Tests
	o Implementation of further tests

                Changes in version 1.13.11 (2018-10-25)                 

    o   Tests
	o Implementation of further tests

                Changes in version 1.13.10 (2018-10-24)                 

    o   Tests
	o Test for the gdepoch function

    o   Code refactoring
	o Simplification of the source code

    o   Performance improvements

                 Changes in version 1.13.9 (2018-10-23)                 

    o   Tests
	o Test for the loss function

    o   Code refactoring
	o Simplification of the source code

                 Changes in version 1.13.8 (2018-10-22)                 

    o   New feature
	o First implementation of tests with testthat

    o   Code refactoring
	o Simplification of the source code

                 Changes in version 1.13.7 (2018-10-10)                 

    o   Bug fixes

                 Changes in version 1.13.6 (2018-10-05)                 

    o   Bug fixes
	o Some minor issues with the calculation of p-values are fixed

                 Changes in version 1.13.5 (2018-10-04)                 

    o   New feature
	o Checks for the validity of inputs added

    o   Performance improvements

                 Changes in version 1.13.4 (2018-10-02)                 

    o   Performance improvements

                 Changes in version 1.13.3 (2018-09-28)                 

    o   Change of dependencies
	o Usage of data.table for various functions for performance improvement

    o   Code refactoring
	o Simplification of the source code

                 Changes in version 1.13.2 (2018-09-27)                 

    o   Bug fixes
	o p-values couldn't be calculated for a gene with only missing values in a batch (#1)

                 Changes in version 1.13.1 (2018-09-25)                 

    o   Change of dependencies
	o BEclear uses now BiocParallel instead of snowfall for parallelisation
	o roxygen2 is now used for the generating the documentation

    o   Code refactoring
	o Internal functions got extracted
	o Methods have now all their own files

    o   Bug fixes 

    o   Performance improvements

                        Changes in version 1.0.0                        

    o   Release with Bioconductor version 3.1

                       Changes in version 0.99.0                        

    o   Submitted to Bioconductor