Package: AnnotationHubData
Type: Package
Title: Transform public data resources into Bioconductor Data
        Structures
Version: 1.43.0
Encoding: UTF-8
Authors@R: c(
	person("Martin", "Morgan", role="ctb"),
	person("Marc", "Carlson", role="ctb"),
	person("Dan", "Tenenbaum", role="ctb"),
	person("Sonali", "Arora", role="ctb"),
	person("Paul", "Shannon", role="ctb"),
	person("Lori", "Shepherd", role="ctb"),
	person("Bioconductor Package Maintainer",
	    email="maintainer@bioconductor.org", role="cre")
	)
Depends: R (>= 3.2.2), methods, utils, S4Vectors (>= 0.7.21), IRanges
        (>= 2.3.23), GenomicRanges, AnnotationHub (>= 2.15.15)
Suggests: RUnit, knitr, BiocStyle, grasp2db, GenomeInfoDbData,
        rmarkdown, HubPub
Imports: GenomicFeatures, Rsamtools, rtracklayer, BiocGenerics,
        jsonlite, BiocManager, biocViews, BiocCheck, graph,
        AnnotationDbi, Biobase, Biostrings, DBI, Seqinfo, GenomeInfoDb
        (>= 1.45.5), OrganismDbi, RSQLite, AnnotationForge,
        futile.logger (>= 1.3.0), XML, RCurl
Description: These recipes convert a wide variety and a growing number
        of public bioinformatic data sets into easily-used standard
        Bioconductor data structures.
License: Artistic-2.0
LazyLoad: yes
biocViews: DataImport
VignetteBuilder: knitr
Collate: Message-class.R ImportPreparer-class.R
        makeAnnotationHubResource.R HubMetadata-class.R
        AnnotationHubMetadata-class.R utils.R updateResources.R
        ahmToJson.R webAccessFunctions.R makeChEA.R makedbSNPVCF.R
        makeEncodeDCC.R makeEnsemblGtfToGRanges.R makeEnsemblFasta.R
        makeEpigenomeRoadmap.R makeGencodeFasta.R makeGencodeGFF.R
        makeGrasp2Db.R makeHaemCode.R makeInparanoid8ToDbs.R
        makeNCBIToOrgDbs.R makeStandardOrgDbsToSqlite.R
        makeStandardTxDbsToSqlite.R makeRefNet.R makeUCSCChain.R
        makeUCSC2Bit.R makeUCSCTracks.R
        trackWithAuxiliaryTableToGRangesRecipe.R
        UCSCTrackUpdateChecker.R makeEnsemblTwoBit.R
        validationFunctions.R
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libpng-dev
        libxml2-dev libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:41:49 UTC
RemoteUrl: https://github.com/bioc/AnnotationHubData
RemoteRef: HEAD
RemoteSha: 47cd0eec3f42d52f36382379afcba12cf43fc354
NeedsCompilation: no
Packaged: 2026-06-18 06:33:53 UTC; root
Author: Martin Morgan [ctb],
  Marc Carlson [ctb],
  Dan Tenenbaum [ctb],
  Sonali Arora [ctb],
  Paul Shannon [ctb],
  Lori Shepherd [ctb],
  Bioconductor Package Maintainer [cre]
Maintainer: Bioconductor Package Maintainer <maintainer@bioconductor.org>