Package: AnnotationHub
Type: Package
Title: Client to access AnnotationHub resources
Version: 4.3.2
Authors@R: 
    c(person("Bioconductor Package", "Maintainer", email="maintainer@bioconductor.org",
             role="cre"),
      person("Martin", "Morgan", role="aut"),
      person("Marc", "Carlson", role="ctb"),
      person("Dan", "Tenenbaum", role="ctb"),
      person("Sonali", "Arora", role="ctb"),
      person("Valerie", "Oberchain", role="ctb"),
      person("Kayla", "Morrell", role="ctb"),
      person("Lori", "Shepherd", role="aut"))
biocViews: Infrastructure, DataImport, GUI, ThirdPartyClient
Description: This package provides a client for the Bioconductor
        AnnotationHub web resource. The AnnotationHub web resource
        provides a central location where genomic files (e.g., VCF,
        bed, wig) and other resources from standard locations (e.g.,
        UCSC, Ensembl) can be discovered. The resource includes
        metadata about each resource, e.g., a textual description,
        tags, and date of modification. The client creates and manages
        a local cache of files retrieved by the user, helping with
        quick and reproducible access.
License: Artistic-2.0
Depends: BiocGenerics (>= 0.15.10), BiocFileCache (>= 2.99.3)
Imports: utils, methods, grDevices, RSQLite, BiocManager, BiocVersion,
        curl, rappdirs, AnnotationDbi (>= 1.31.19), S4Vectors, httr2,
        yaml, dplyr, BiocBaseUtils
Suggests: IRanges, Seqinfo, GenomeInfoDb, GenomicRanges,
        VariantAnnotation, Rsamtools, rtracklayer, BiocStyle, knitr,
        AnnotationForge, rBiopaxParser, RUnit, txdbmaker, MSnbase, mzR,
        Biostrings, CompoundDb, keras, ensembldb, SummarizedExperiment,
        ExperimentHub, gdsfmt, rmarkdown, HubPub
Enhances: AnnotationHubData
Collate: AnnotationHubOption.R AllGenerics.R Hub-class.R db-utils.R
        AnnotationHub-class.R AnnotationHubResource-class.R
        BEDResource-class.R ProteomicsResource-class.R
        EpigenomeResource-class.R EnsDbResource-class.R utilities.R
        sql-utils.R Hub-utils.R cache-utils.R zzz.R
VignetteBuilder: knitr
BugReports: https://github.com/Bioconductor/AnnotationHub/issues
NeedsCompilation: yes
RoxygenNote: 7.3.2
Config/pak/sysreqs: libicu-dev libpng-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-06-30 17:36:56 UTC
RemoteUrl: https://github.com/bioc/AnnotationHub
RemoteRef: HEAD
RemoteSha: b406e89030efd8e164f2c00f6ece5ec98ee4301d
Packaged: 2026-06-30 22:39:12 UTC; root
Author: Bioconductor Package Maintainer [cre],
  Martin Morgan [aut],
  Marc Carlson [ctb],
  Dan Tenenbaum [ctb],
  Sonali Arora [ctb],
  Valerie Oberchain [ctb],
  Kayla Morrell [ctb],
  Lori Shepherd [aut]
Maintainer: Bioconductor Package Maintainer <maintainer@bioconductor.org>