Version: 1.12.0
Text:

Version: 1.10.0
Category: NEW FEATURES
Text: minFreqFilt and minCountFilt

Version: 1.10.0
Category: SIGNIFICANT USER-VISIBLE CHANGES
Text: The Phase2Genotype function now treats phase 0 as the ref allele
        and phase 1 as the alternative allele.

Version: 1.8.0
Category: NEW FEATURES
Text: genotype accessor requires reference and alternative allele
        information

Version: 1.8.0
Category: NEW FEATURES
Text: genotype setter requires reference allele information

Version: 1.8.0
Category: NEW FEATURES
Text: reference fraction is now accessed through fraction(ASEset,
        top.allele.criteria="ref")

Version: 1.8.0
Category: NEW FEATURES
Text: for a more robust performance unit tests are now covering the
        most crucial calculations, such as e.g. fraction, frequency,
        summary, mapbias and phase specific calculations.

Version: 1.6.0
Category: NEW FEATURES
Text: ASEset slot for Phase information

Version: 1.6.0
Category: NEW FEATURES
Text: generation of masked reference genomes

Version: 1.6.0
Category: NEW FEATURES
Text: calculation of reference fraction 'refFraction'

Version: 1.2.0
Category: NEW FEATURES
Text: Faster getAlleleCounts()

Version: 1.2.0
Category: BUG FIXES
Text: Fixed bug in the "realCigarPosition" function, that otherwise
        could generate an error.