To cite ALDEx2 in publications use, use any of the first three citations. To cite scale simulation, please use the last reference (Nixon et. al. (2022)). Fernandes, AD, Macklaim, JM, Linn, TG, Reid, G, Gloor, GB (2013). “*** ANOVA-Like Differential Gene Expression Analysis of Single-Organism and Meta-RNA-Seq.” _*** PLoS ONE, 2013, volume 8, issue 7, e67019_. <***%20http://dx.doi.org/10.1371/journal.pone.0067019>. A BibTeX entry for LaTeX users is @Article{, title = {*** ANOVA-Like Differential Gene Expression Analysis of Single-Organism and Meta-RNA-Seq}, author = {{Fernandes} and {AD} and {Macklaim} and {JM} and {Linn} and {TG} and {Reid} and {G} and {Gloor} and {GB}}, journal = {*** PLoS ONE, 2013, volume 8, issue 7, e67019}, isbn = {*** 3-900051-07-0}, year = {2013}, url = {*** http://dx.doi.org/10.1371/journal.pone.0067019}, } Fernandes, D. A, Reid, J., Macklaim, M. J, McMurrough, T.A, Edgell, D.R., Gloor, B. G (2014). “*** Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis.” _*** Microbiome, 2014, volume 2, 15_. <***%20http://dx.doi.org/10.1186/2049-2618-2-15>. A BibTeX entry for LaTeX users is @Article{, title = {*** Unifying the analysis of high-throughput sequencing datasets: characterizing RNA-seq, 16S rRNA gene sequencing and selective growth experiments by compositional data analysis}, author = {{Fernandes} and A. D. and {Reid} and {J.} and {Macklaim} and J. M. and {McMurrough} and {T.A} and {Edgell} and {D.R.} and {Gloor} and G. B.}, journal = {*** Microbiome, 2014, volume 2, 15}, year = {2014}, url = {*** http://dx.doi.org/10.1186/2049-2618-2-15}, } Gloor GB, Macklaim JM, Fernandes AD (2016). “*** Displaying Variation in Large Datasets: a Visual Summary of Effect Sizes.” _*** Journal of Computational and Graphical Statistics,_. <***%20http://dx.doi.org/10.1080/10618600.2015.1131161>. A BibTeX entry for LaTeX users is @Article{, title = {*** Displaying Variation in Large Datasets: a Visual Summary of Effect Sizes}, author = {Gregory B. Gloor and Jean M. Macklaim and Andrew D. Fernandes}, journal = {*** Journal of Computational and Graphical Statistics,}, year = {2016}, url = {*** http://dx.doi.org/10.1080/10618600.2015.1131161}, } Nixon MP, Letourneau J, David LA, Mukherjee S, Silverman JD (2022). “*** A Statistical Analysis of Compositional Surveys.” _*** ArVix Preprint: 2201.03616,_. <***%20https://arxiv.org/abs/2201.03616>. A BibTeX entry for LaTeX users is @Article{, title = {*** A Statistical Analysis of Compositional Surveys}, author = {Michelle Pistner Nixon and Jeffrey Letourneau and Lawrence A. David and Sayan Mukherjee and Justin D. Silverman}, journal = {*** ArVix Preprint: 2201.03616,}, year = {2022}, url = {*** https://arxiv.org/abs/2201.03616}, }